This TURBO PASCAL program (Haplodiv for Windows and Linux) is based on the paper by Odile Pons and Rémy J. Petit (Petit@pierroton.inra.fr) (TAG 1995, 90:462-470).
It computes measures of diversity and differenciation from haploid populationgenetic data.
The source file should be an ASCII file (its name should have 8 characters maximum: 12345678.txt) and should include the following information :
First line :
Number of cytotypes Number of populations
see the example (example.txt and example.out):
12 41
The program is dimensionned for a maximum number of 25 cytotypes and of 200 populations. If you have more than this, it means the PASCAL program haplodiv.pas should be modified accordingly and re-compiled.
Indicate then the number of individuals having a given cytotype (column) in a given population (row). Example:
0 0 0 0 0 0 0 0 3 1 0 0
0 0 0 0 0 0 0 0 3 0 0 0
0 0 0 0 0 0 0 0 5 0 0 0
0 0 0 3 0 0 0 0 0 0 0 0
etc... (12 colomns x 41 rows)
No column should be empty (no missing haplotype) and each population (row) should be composed of AT LEAST 3 individuals!
Download it and Good luck!