Inheritance and mapping studies in gymnosperms 07/2000

Inheritance and mapping studies in gymnosperms

(last update 01/2004)

Please contact David Chagné to submit new references

Marker type Species References Study* Population**

Morphological Ginkgo biloba O'Malley and Kelly, 1988 I OP

Isozymes Pinus rigida Guries et al., 1978
O'Malley et al., 1986
I
I
OP (9 trees)
OP

Pinus sylvestris Rudin and Ekberg, 1978
Niebling et al., 1987
I
I
OP
OP (24 trees)

Pinus ponderosa O'Malley et al., 1979 I OP

Pseudotzuga menziesii El-Kassaby et al., 1982 I OP

Pinus banksiana Cheliak et al., 1984 I OP

Pinus attenuata Strauss and Conkle, 1986 I OP

Pinus thungergii Shiraishi, 1988 I OP (18 trees)

Pinus taeda Devey et al., 1994
Groover et al., 1994
M
M
TGOP
TGOP

Cryptomeria japonica Mukai et al., 1995 M F2

Proteins Pinus pinaster Bahrman and Damerval, 1989
Gerber et al., 1993
Plomion et al., 1995a
Plomion et al., 1997
Costa et al., 2000
M
M
M
M
M
OP
OP (18 trees)
F2/OP
F2/OP
F2/OP

RFLP Pinus taeda Devey et al., 1991
Devey et al., 1994
Groover et al., 1994
Sewell et al., 1999
Devey et al, 1999
I
M
M
M
M
TGOP
TGOP
TGOP
TGOP
TGOP

Pseudotsuga menziesii Jermstad et al., 1994
Jermstad et al., 1998
I
M
TGOP
TGOP

Pinus radiata Devey et al., 1996
Devey et al, 1999
M
M
TGOP
TGOP

Cryptomeria japonica Mukai et al., 1995 M F2

Larix kaempferi Arcade et al., 2000 M F1

Larix decidua Arcade et al., 2000 M F1

RAPD Pinus pinaster Plomion et al., 1995a, b
Plomion et al., 1996
Costa et al., 2000
M
M
M
F2/OP
F2
F2/OP

Pseudotsuga menziesii Krutovskii et al., 1998
Jermstad et al., 1994
Jermstad et al., 1998
Carlson et al., 1991
M
I
M
I
OP
TGOP
TGOP
F1

Picea glauca Tulsieram et al., 1992 M OP

Pinus elliottii Nelson et al., 1993
Kubisiak et al., 1995
Dale and Teasdale, 1995
M
M
M
OP
F1
F1

Pinus palustris Nelson et al., 1994
Kubisiak et al., 1995
Kubisiak et al., 1996
M
M
M
OP
F1
OP

Picea abies Binelli and Bucci, 1994
Bucci et al., 1997
Bucci and Menozzi, 1993
M
M
I

OP
OP (48 trees)
OP

Pinus sylvestris Yazdani et al., 1995
Lu et al., 1995
Hurme and Savolainen, 1999
M
I
M
OP
OP (8 trees), F1
F1

Pinus strobus Echt and Nelson, 1997 M OP

Pinus nigra Kaya and Neale, 1993 I OP (8 trees)

Pinus brutia Kaya and Neale, 1995
Kaya and Neale, 1993
M
I
OP
OP (8 trees)

Taxus brevifolia Göçmen et al., 1996 M OP

Pinus radiata Devey et al., 1996 M TGOP

Cryptomeria japonica Mukai et al., 1995 M F2

Pinus caribaea Dale and Teasdale, 1995 M F1

Larix kaempferi Arcade et al., 2000 M F1

Larix decidua Arcade et al., 2000 M F1

Pinus leucodermis Boscherini et al., 1994 I OP

Pinus contorta Li and Yeh, 2001 M OP

Pinus palustris x Pinus elliottii Weng et al., 2002 M F1

Pinus halepensis Gomez et al., 2003 M OP

AFLP Picea abies Paglia and Morgante, 1998
Paglia et al., 1998
I
M
OP
OP

Pinus taeda Remington et al., 1999 M OP

Pinus pinaster Costa et al., 2000
Chagné et al, 2002
Ritter et al. 2002
M
M
M
F2/OP
TGOP
F1

Pinus edulis Travis et al., 1998 M OP

Larix kaempferi Arcade et al., 2000 M F1

Larix decidua Arcade et al., 2000 M F1

Cryptomeria Japonica Nikaido et al, 2000 M F1

Pinus thunbergii Hayashi et al, 2001 M OP

Pinus sylvestris Lerceteau et al., 2000
Yin et al., 2003
M
M
F1
F1

Pinus contorta Hayashi et al., 2002 M F1

Pinus elliottii x Pinus caribaea Shepherd et al., 2003 M F1

SAMPL Picea abies Paglia and Morgante, 1998
Paglia et al., 1998
I
M
OP
OP

SSR Picea abies Scotti et al. 2000
Pfeiffer et al., 1997
Paglia and Morgante, 1998
Paglia et al., 1998
M
I
I
M
TGOP
OP
OP
OP

Pinus strobus Echt et al., 1996
Echt and Nelson, 1997
I
M
OP
OP

Pinus pinaster Mariette et al., 2001 I, M F2

Pinus taeda Williams et al., 1999
Elsik et al., 2000
I
I
OP
OP

Pinus radiata

Smith and Devey, 1994
Devey et al., 1996
Fisher et al.,1996
Fisher et al., 1998
Wilcox et al., 2001
I
M
I
I,M
M
TGOP
TGOP
OP
F1
F1

Sitka spruce van de Ven and McNicol, 1996 I F1

STS - EST Pinus pinaster Plomion et al., 1998
Chagné et al., 2003
I, M
M
F2/OP
TGOP

Pinus sylvestris Plomion et al., 1998
Komulainen et al., 2003
I
M
F1
F1

Pinus strobus Echt and Nelson, 1997 M OP

Pinus taeda Harry et al., 1998
Temesguen et al, 2001
Brown et al. 2001
I,M
M
M
OP, TGOP
TGOP
TGOP

Pinus radiata Cato et al, 2000 I,M F1

Picea mariana Perry and Bousquet, 1998 a,b I OP

Cryptomeria japonica Tsumura et al., 1997
Nikaido et al, 2000
Iwata et al. 2001
M
M
M
F2
F2
F2

Pinus contorta Hayashi et al. 2002 M F1

Marker type	Species	References	Study*	Population**
Morphological	Ginkgo biloba	O'Malley and Kelly, 1988	I	OP
Isozymes	Pinus rigida	Guries et al., 1978 O'Malley et al., 1986	I I	OP (9 trees) OP
	Pinus sylvestris	Rudin and Ekberg, 1978 Niebling et al., 1987	I I	OP OP (24 trees)
	Pinus ponderosa	O'Malley et al., 1979	I	OP
	Pseudotzuga menziesii	El-Kassaby et al., 1982	I	OP
	Pinus banksiana	Cheliak et al., 1984	I	OP
	Pinus attenuata	Strauss and Conkle, 1986	I	OP
	Pinus thungergii	Shiraishi, 1988	I	OP (18 trees)
	Pinus taeda	Devey et al., 1994 Groover et al., 1994	M M	TGOP TGOP
	Cryptomeria japonica	Mukai et al., 1995	M	F2
Proteins	Pinus pinaster	Bahrman and Damerval, 1989 Gerber et al., 1993 Plomion et al., 1995a Plomion et al., 1997 Costa et al., 2000	M M M M M	OP OP (18 trees) F2/OP F2/OP F2/OP
RFLP	Pinus taeda	Devey et al., 1991 Devey et al., 1994 Groover et al., 1994 Sewell et al., 1999 Devey et al, 1999	I M M M M	TGOP TGOP TGOP TGOP TGOP
	Pseudotsuga menziesii	Jermstad et al., 1994 Jermstad et al., 1998	I M	TGOP TGOP
	Pinus radiata	Devey et al., 1996 Devey et al, 1999	M M	TGOP TGOP
	Cryptomeria japonica	Mukai et al., 1995	M	F2
	Larix kaempferi	Arcade et al., 2000	M	F1
	Larix decidua	Arcade et al., 2000	M	F1
RAPD	Pinus pinaster	Plomion et al., 1995a, b Plomion et al., 1996 Costa et al., 2000	M M M	F2/OP F2 F2/OP
	Pseudotsuga menziesii	Krutovskii et al., 1998 Jermstad et al., 1994 Jermstad et al., 1998 Carlson et al., 1991	M I M I	OP TGOP TGOP F1
	Picea glauca	Tulsieram et al., 1992	M	OP
	Pinus elliottii	Nelson et al., 1993 Kubisiak et al., 1995 Dale and Teasdale, 1995	M M M	OP F1 F1
	Pinus palustris	Nelson et al., 1994 Kubisiak et al., 1995 Kubisiak et al., 1996	M M M	OP F1 OP
	Picea abies	Binelli and Bucci, 1994 Bucci et al., 1997 Bucci and Menozzi, 1993	M M I	OP OP (48 trees) OP
	Pinus sylvestris	Yazdani et al., 1995 Lu et al., 1995 Hurme and Savolainen, 1999	M I M	OP OP (8 trees), F1 F1
	Pinus strobus	Echt and Nelson, 1997	M	OP
	Pinus nigra	Kaya and Neale, 1993	I	OP (8 trees)
	Pinus brutia	Kaya and Neale, 1995 Kaya and Neale, 1993	M I	OP OP (8 trees)
	Taxus brevifolia	Göçmen et al., 1996	M	OP
	Pinus radiata	Devey et al., 1996	M	TGOP
	Cryptomeria japonica	Mukai et al., 1995	M	F2
	Pinus caribaea	Dale and Teasdale, 1995	M	F1
	Larix kaempferi	Arcade et al., 2000	M	F1
	Larix decidua	Arcade et al., 2000	M	F1
	Pinus leucodermis	Boscherini et al., 1994	I	OP
	Pinus contorta	Li and Yeh, 2001	M	OP
	Pinus palustris x Pinus elliottii	Weng et al., 2002	M	F1
	Pinus halepensis	Gomez et al., 2003	M	OP
AFLP	Picea abies	Paglia and Morgante, 1998 Paglia et al., 1998	I M	OP OP
	Pinus taeda	Remington et al., 1999	M	OP
	Pinus pinaster	Costa et al., 2000 Chagné et al, 2002 Ritter et al. 2002	M M M	F2/OP TGOP F1
	Pinus edulis	Travis et al., 1998	M	OP
	Larix kaempferi	Arcade et al., 2000	M	F1
	Larix decidua	Arcade et al., 2000	M	F1
	Cryptomeria Japonica	Nikaido et al, 2000	M	F1
	Pinus thunbergii	Hayashi et al, 2001	M	OP
	Pinus sylvestris	Lerceteau et al., 2000 Yin et al., 2003	M M	F1 F1
	Pinus contorta	Hayashi et al., 2002	M	F1
	Pinus elliottii x Pinus caribaea	Shepherd et al., 2003	M	F1
SAMPL	Picea abies	Paglia and Morgante, 1998 Paglia et al., 1998	I M	OP OP
SSR	Picea abies	Scotti et al. 2000 Pfeiffer et al., 1997 Paglia and Morgante, 1998 Paglia et al., 1998	M I I M	TGOP OP OP OP
	Pinus strobus	Echt et al., 1996 Echt and Nelson, 1997	I M	OP OP
	Pinus pinaster	Mariette et al., 2001	I, M	F2
	Pinus taeda	Williams et al., 1999 Elsik et al., 2000	I I	OP OP
	Pinus radiata	Smith and Devey, 1994 Devey et al., 1996 Fisher et al.,1996 Fisher et al., 1998 Wilcox et al., 2001	I M I I,M M	TGOP TGOP OP F1 F1
	Sitka spruce	van de Ven and McNicol, 1996	I	F1
STS - EST	Pinus pinaster	Plomion et al., 1998 Chagné et al., 2003	I, M M	F2/OP TGOP
	Pinus sylvestris	Plomion et al., 1998 Komulainen et al., 2003	I M	F1 F1
	Pinus strobus	Echt and Nelson, 1997	M	OP
	Pinus taeda	Harry et al., 1998 Temesguen et al, 2001 Brown et al. 2001	I,M M M	OP, TGOP TGOP TGOP
	Pinus radiata	Cato et al, 2000	I,M	F1
	Picea mariana	Perry and Bousquet, 1998 a,b	I	OP
	Cryptomeria japonica	Tsumura et al., 1997 Nikaido et al, 2000 Iwata et al. 2001	M M M	F2 F2 F2
	Pinus contorta	Hayashi et al. 2002	M	F1

*I=inheritance, M=mapping

**OP= open pollinated familly (megagametophytes)

OP/F2= F2 selfed familly (megagametophyte)

TGOP= three-genaration outbred pedigree

F1 =full-sib progeny

F2=self-pollinated progeny

References

Arcade A, Anselin F, Faivre Rampant P, Lesage MC, Laurans F, Paques LE, Prat D (2000) Application of AFLP, RAPD and ISSR markers to genetic mapping of European larch and Japanese larch. Theor Appl Genet 100: 299-307

Bahrman N, Damerval C (1989) Linkage relationships of loci controlling protein amounts in maritime pine (Pinus pinaster Ait). Heredity 63: 267-274

Binelli G, Bucci G (1994) A genetic linkage map of Picea abies Karts, based on RAPD markers, as a tool in population genetics. Theor Appl Genet 88: 283-288

Boscherini G, Morgante M, Rossi P, Vendramin G, Vicario F (1994) Detection of DNA polymorphisms in pinus leucodermis ant. using random amplifications. Forest Genetics 1 (3) : 131-137

Brown GR, Kadel EE III, Bassoni DL, Kiehne KL, Temesgen B, van Buijtenen JP, Sewell MM, Marshall KA, Neale DB (2001) Anchored reference loci in loblolly pine (Pinus taeda L.) for integrating pine genomics. Genetics 159:799-809

Bucci G, Kubisiak TL, Nance WL, Menozzi P (1997) A population consensus partial linkage map of Picea abies Karst. Based on RAPD markers. Theor Appl Genet 95: 643-654

Bucci G, Menozzi P (1993) Segregation analysis of random amplified polymorphic DNA (RAPD) markers in Picea abies Karst. Mol Ecol 2:227-232

Carlson JE, Tulsieram LK, Glaubitz JC, Luk VWK, Kauffeld C, Rutledge R (1991) Segregation of random amplified DNA markers in F1 progeny of conifers. Theor Appl Genet 83: 194-200

Cato SA, Gardner RC, Kent J, Warr AA, Echt CS, Richardson TE (2000) A rapid PCR-based method for genetically mapping ESTs. Theor Appl Genet (in press)

Chagné D, Lalanne C, Madur D, Kumar S, Frigerio JM, Krier C, Decroocq S, Savouré A, Bou-Dagher-Kharrat M, Bertocchi E, Brach J, Plomion C (2002) A high density genetic map of Maritime pine based on AFLPs. Ann. For. Sci. 59: 627-636

Chagné, D.; Brown, G.; Lalanne, C.; Madur, D.; Pot, D.; Neale, D.; Plomion, C. (2003) Comparative genome and QTL mapping between maritime and loblolly pines. Molecular Breeding 12 (3) : 185-195

Cheliak WM, Morgan K, Dancik BP, Strobec KC, Yeh FC (1984) Segregation of allozymes in megagametophytes of viable seed from a natural population of jack pine, Pinus banksiana Lamb. Theor Appl Genet 69:145-151

Costa P, Pot D, Dubos C, Frigerio J-M, Pionneau C, Bodénès C, Bertocchi E,Cervera M, Remington DL, Plomion C (2000) A genetic map of Maritime pine based on AFLP, RAPD and protein markers. Theor Appl Genet 100:39-48

Dale G, Teasdale B (1995) Analysis of growth, form and branching traits in an F2 population of the Pinus elliottii x Pinus caribaea interspecific hybrid using RAPD markers. In: Proceedings of the 25th Southern Forest Tree Improvement Conference, pp242-253

Devey ME, Bell JC, Smith DN, Neale DB, Moran GF (1996) A genetic map for Pinus radiata based on RFLP, RAPD and microsatellite markers. Theor Appl Genet 92: 673-679

Devey ME, Fiddler TA, Liu B-H, Knapp SJ, Neale BD (1994) An RFLP linkage map for loblolly pine based on a three-generation outbred pedigree. Theor Appl Genet 88: 273-278

Devey ME, Jermstad KD, Tauer CG, Neale DB (1991) Inheritance of RFLP loci in a loblolly pine three-generation pedigree. Theor Appl Genet 83:238-242

Devey ME, Sewell MM, Uren TL, Neale DB (1999) Comparative mapping in loblolly and radiata pine using RFLP and microsatellite markers. Theor Appl Genet 99 : 656-662

Echt CS, Nelson CD (1997) Linkage mapping and genome length in eastern white pine (Pinus strobus L.). Theor Appl Genet 94:1031-1037

Echt CS, May-Marquardt P, Hseih M, Zahorchak R (1996) Characterization of microsatellite markers in eastern white pine. Genome 39: 1102-1108

El-Kassaby YA, Sziklai O, Yeh FC (1982) Linkage relationships among 9 polymorphic allozyme loci in coastal Douglas-fir (Pseudotsuga menziesii var. menziesii).Can J Genet Cytol 124:101-108

Elsik CG, Minihan VT, Hall SE, Scarpa AM, Williams CG (2000) Low-copy microsatellite markers for Pinus taeda L.. Genome 43 : 550-555

Fisher PJ, Gardner RC, Richardson TE (1996) Single locus microsatellites isolated using 5' anchored PCR. Nuc. Acid. Res. 24: 4369-4371

Fisher PJ, Richardson TE, Gardner RC (1998) Characteristics of single- and multi-copy microsatellites from Pinus radiata. Theor Appl Genet 96: 969-979

Gerber S, Rodolphe F, Bahrman N, Baradat P (1993) Seed-protein variation in maritime pine (Pinus pinaster Ait) revealed by two-dimensional electrophoresis: genetic determinism and construction of a linkage map. Theor Appl Genet 85: 521-528

Göçmen B, Jermstad KD, Neale DB, Kaya Z (1996) Development of random amplified polymorphic DNA markers for genetic mapping in pacific yew (Taxus brevifolia). Can J For Res 26: 497-503

Gomez, A.; Aravanopoulos, F. A.; Bueno, M. A.; Alia, R. Linkage of random amplified polymorphic DNA markers in Pinushalepensis Mill. Silvae Genetica 51 (5/6) : 196-201

Groover A, Devey M, Fiddler T, Lee J, Megraw R, Mitchel-Olds T, Sherman B, Vujcic S, Williams C, Neale D (1994) Identification of quantitative trait loci influencing wood specific gravity in an outbred pedigree of loblolly pine. Genetics 138: 1293-1300

Guries RP, Friedman ST, Ledig FT (1978) A megagametophyte analysis of genetic linkage in pitch pine (Pinus rigida Mill). Heredity 40:309-314

Harry DE, Temesgen B, Neale D (1998) Codominant PCR-based markers of Pinus taeda developed from mapped cDNA clones. Theor Appl Genet 97: 327-336

Hayashi E, Kondo T, Terada K, Kuramoto N, Goto Y, Okamura M, Kawasaki (2001) Linkage map of Japanese black pine based on AFLP and RAPD markers including markers linked to resistance against the pine needle gall midge. Theor Appl Genet 102 : 871-875

Hayashi, E.; Kondo, T.; Terada, K.; Kuramoto, N.; Goto, Y.; Okamura, M.; Kawasaki, H (2002) Linkage map based on AFLP and RAPD markers in Japanese black pine. Bulletin of the National Forest Tree Breeding Center (No.18) : 49-57

Hayashi, E.; Kondo, T.; Terada, K.; Kuramoto, N.; Kaundun, S. S. (2002) Transferability of EST (Expressed Sequence Tag) developed in loblolly pine to Japanese black pine. Bulletin of the National Forest Tree Breeding Center (No.18) : 59-67

Hurme P, Savolainen O (1999) Comparison of homology and linkage of random amplified polymorphic DNA (RAPD) markers between individual trees of Scots pine (Pinus sylvetris L.)

Iwata H, Ujino-Ihara T, Yoshimura K, Nagasaka K, Mukai Y, Tsumura Y (2001) Leaved amplified polymorphic markers in sugi, Cryptomeria japonica D. Don, and their locations on linkage map. Theor Appl Genet 103: 881-895

Jermstad KD, Reem AM, Henifin JR, Wheeler NC, Neale DB (1994) Inheritance of restriction fragment length polymorphisms and random amplified polymorphic DNAs in coastal Douglas-fir. Theor Appl Genet 89: 758-766

Jermstad KD, Bassoni DL, Wheeler NC, Neale DB (1998) A sex-averaged genetic linkage map in coastal Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco var 'menziesii') based on RFLP and RAPD markers. Theor Appl Genet 97:762-770

Kaya Z, Neale DB (1993) Random amplified polymorphic DNA (RAPD) polymorphisms in Pinus nigra subsp. Pallasiana and Pinus brutia. Tr J Agr For 17: 295-306

Kaya Z, Neale DB (1995) Utility of random amplified polymorphic DNA (RAPD) markers for linkage mapping in Turkish red pine (Pinus brutia Ten.). Silvae Genet 44: 110-116

Komulainen, P.; Brown, G. R.; Mikkonen, M.; Karhu, A.; Garcia-Gil, M. R.; O'Malley, D.; Lee, B.; Neale, D. B.; Savolainen, O. (2003) Comparing EST-based genetic maps between Pinus sylvestris and Pinus taeda. Theoretical and Applied Genetics 107 (4) : 667-678

Krutovskii KV, Vollmer SS, Sorensen FC, Adams WT, Knapp SJ, Strauss SH (1998) RAPD genome maps of douglas fir. J Hered 89: 197-205

Kubisiak TL, Nelson CD, Nance WL, Stine M (1995) RAPD linkage mapping in a longleaf pine x slash pine F1 family Theor Appl Genet 90: 1110-1127

Kubisiak TL, Nelson CD, Nance WL, Stine M (1996) Comparison of RAPD linkage maps constructed for a single longleaf pine from both haploid and diploid mapping populations. For Genet 3: 203-211

Lerceteau E, Plomion C, Andersson B (2000) AFLP mapping and detection of quantitative trait loci (QTLs) for economically important traits in Pinus sylvestris: a preliminary study. Molecular Breeding 6 (5) : 451-458

Li C and Yeh FC (2001) Construction of a framework map in Pinus contorta subsp. latifolia using random amplified polymorphic DNA markers. Genome 44: 147-153

Lu M-Z, Szmidt AE, Wang X-R (1995) Inheritance of RAPD fragments in haploid and diploid tissues of Pinus sylvestris (L.). Heredity 74: 582-589

Mariette S, Chagné D, Decroocq S, Vendramin GG, Lalanne C, Madur C, Plomion C (2001) Microsatellite markers for Pinus pinaster Ait.. Ann. For. Sci. Ann. For. Sci. 58: 203-206

Mukai Y, Suyama Y, Tsumura Y, Kawahara T, Yoshimaru H, Hondo T, Tomaru N, Kuramoto N, Murai M (1995) A linkage map for sugi (Cryptomeria japonica) based on RFLP, RAPD, and isozyme loci. Theor Appl Genet 90: 835-840

Nelson CD, Kubisiak TL, Stine M, Nance WL (1994) A genetic linkage map of longleaf pine (Pinus palustris Mill) based on ramdom amplified polymorphicd DNAs. J Hered 85: 433-439

Nelson, CD, Nance, WL AND Doudrick, RL 1993 A partial genetic linkage map of Slash pine (Pinus elliotti Englem var elliottii) based on random amplified polymorphic DNA's. Theor Appl Genet 87: 145-151

Nikaido AM, Ujino T, Iwata H, Yoshimura K, Yoshimura H, Suyama Y, Murai M, Nagasaka K, Tsumura Y (2000) AFLP and CAPS linkage maps of Cryptomeria Japonica. Theor Appl Genet 100: 825-831

Niebling CR, Johnson K, Gerhold HD (1987) Electrophoretic analysis of genetic linkage in Scots pine (Pinus sylvestris L) Biochem Genet 25: 803-814

O'Malley D, Kelly JM (1988) Segregation of a megagametophyte color polymorphism in Ginkgo biloba L. J Here 79: 51-53

O'Malley DM, Allendorf FM, Blake GM (1979) Inheritance of isozyme variation and heterozygosity in Pinus ponderosa. Biochem Genet 17: 233-250

O'Malley DM, Guries RP, Nordheim EV (1986) Linkage analysis for 18 enzyme loci in Pinus rigida Mill. Theor Appl Genet 72: 530-535

Paglia GP, Olivieri AM, Morgante M (1998) Towards second-generation STS (sequence-tagged sites) linkage maps in conifers: a genetic map of norway spruce (Picea abies K.). Mol Gen Genet 258:466-478

Paglia GP, Morgante M (1998) PCR-based multiplex DNA fingerprinting techniques for the analysis of conifer genomes. Mol Breeding 4:173-177

Perry DJ, Bousquet J (1998a) Sequence-tagged-site (STS) markers of arbitrary genes: the utility of black spruce-derived STS primers in other conifers. Theor Appl Genet 97: 735-743

Perry DJ, Bousquet J (1998b) Sequence-tagged-site (STS) markers of arbitrary genes : development, characterization and analysis of linkage in black spruce. Genetics 149 : 1089-1098

Pfeiffer A, Olivieri AM, Morgante M (1997) Identification and characterization of microsatellites in norway spruce (Picea abies K.). Genome 40: 411-419

Plomion C, Bahrman N, Durel C-E, O'Malley DM (1995a) Genomic mapping in Pinus pinaster (maritime pine) using RAPD and protein markers Heredity 74:661-668

Plomion C, O'Malley DM, Durel C-E (1995b) Genomic analysis in maritime pine (Pinus pinaster) Comparison of two RAPD maps using selfed and open-pollinated seeds of the same individual Theor Appl Genet 90: 1028-1034

Plomion C, O'Malley DM (1996) Recombination rate differences for pollen parents and seed parents in pine Heredity 77: 341-350

Plomion C, Costa P, Bahrman N (1997) Genetic analysis of needle protein in Maritime pine 1 Mapping dominant and codominant protein markers assayed on diploid tissue, in a haploid-based genetic map Silvae Genet 46: 161-165

Plomion C, Hurme P, Frigerio J-M, Ridolphi M, Pot D, Pionneau C, Avila C, Gallardo F, David H, Neutlings G, Campbell M, Canovas FM, Savolainen O, Bodénès C, Kremer A (1998) Developing SSCP markers in two Pinus species. Mol Bred (in press)

Remington DL, Whetten RW, Liu BH, O'Malley DM (1999) Construction of an AFLP genetic map with nearly complete coverage in Pinus taeda. Theor Appl Genet (in press)

Ritter, E.; Aragones, A.; Markussen, T.; Achere, V.; Espinel, S.; Fladung, M.; Wrobel, S.; Faivre-Rampant, P.; Jeandroz, S.; Favre, J. M. (2002) Towards construction of an ultra high density linkage map for Pinus pinaster. Ann For Sci 59 (5/6) : 637-643

Rudin, D and Ekberg, I (1978) Linkage studies in Pinus sylvestris L - using macro gametophyte allozymes. Silvae Genet 27: 1-13

Scotti I, Madur D, Lalanne C, Hedley P, Chagné D, Janson G, Yazdani R, Neale D, Brown G, Frigerio JM, Morgante M, Plomion C (2000) A Picea abies linkage map including SSR, EST, AFLP and S-SAP. (in prep.)

Sewell MM, Sherman BK, Neale DB (1999) A consensus map for loblolly pine (Pinus taeda L.). I. Construction and integration of individual linkage maps from two outbred three-generation pedigrees. Genetics 151:321-330

Shepherd, M.; Cross, M.; Dieters, M. J.; Henry, R. (2003) Genetic maps for Pinus elliottii var. elliottii and P. caribaea var. hondurensis using AFLP and microsatellite markers. Theoretical and Applied Genetics 106 (8) : 1409-1419

Shiraishi S (1988) Linkage relationships among allozyme loci in Japanese black pine, Pinus thunbergii Parl. Silvae Genet 37: 60-66

Smith DN, Devey ME (1994) Occurrence and inheritance of microsatellites in Pinus radiata Genome 37: 977-983

Strauss SH, Conkle MT (1986) Segregation, linkage, and diversity of allozymes in knobcone pine. Theor Appl Genet 72: 483-493

Temesguen B, Brown G, Harry DE, Kinlaw CS, Sewell MM, Neale DB (2001) Genetic mapping of expressed sequence tag polymorphism (ESTP) markers in loblolly pine (Pinus taeda L.). Theor Appl Genet 102 : 664-675

Travis SE, Ritland K, Whitman TG, Keim P (1998) A genetic linkage map of Pinyon pine (Pinus edulis) based on amplified fragment length polymorphisms. Theor Appl Genet 97: 871-880

Tsumura, Y., Suyama, Y., Yoshimura, K., Shirato, N. and Mukai, Y. (1997) Sequence-tagged-sites (STSs) of cDNA clones in Cryptomea japonica and their evaluation as molecular markers in conifers. Theor Appl Genet 94: 764-772

Tulsieram LK, Glaubitz JC, Kiss G, Carlson JE (1992) Single tree genetic linkage analysis in conifers using haploid DNA from megagametophytes. BioTechnology 10: 686-690

van de Ven WTG, McNicol RJ (1996) Microsatellites as DNA markers in sitka spruce. Theor Appl Genet 93: 613-617

Weng C, Kubisiak T L, Nelson CD, Stine M (2002) Mapping quantitative trait loci controlling early growth in a (longleaf pine x slash pine) x slash pine BC1 family. Theoretical and Applied Genetics 104 (5) : 852-859

Wilcox, P. L.; Richardson, T. E.; Corbett, G. E.; Ball, R. D.; Lee, J. R.; Djorovic, A.; Carson, S. D. (2001) Framework linkage maps of Pinus radiata D. Don based on pseudotestcross markers. Forest Genetics 8 (2) : 109-117

Williams CG, Elsik CG, Barnes RD (1999) Microsatellite analysis of Pinus taeda L. in Zimbabwe. Heredity 84 : 261-268

Yazdani R, Yeh F, Rimsha J (1995) Genomic mapping of Pinus sylvestris (L) using random amplified polymorphic DNA markers. For Genet 2: 109-116

Yin, T. M.; Wang, X. R.; Andersson, B.; Lerceteau-Kohler, E. (2003) Nearly complete genetic maps of Pinus sylvestris L. (Scots pine) constructed by AFLP marker analysis in a full-sib family. Theoretical and Applied Genetics 106 (6) : 1075-1083